Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT4P19013 COL6A4P2-202ENST00000504443 2753 ntBASIC14.98□□□□□ -0.01
KRT4P19013 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
KRT4P19013 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT4P19013 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT4P19013 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT4P19013 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT4P19013 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT4P19013 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT4P19013 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KRT4P19013 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT4P19013 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT4P19013 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT4P19013 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
KRT4P19013 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT4P19013 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT4P19013 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KRT4P19013 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KRT4P19013 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
KRT4P19013 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KRT4P19013 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.97□□□□□ -0.01
KRT4P19013 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
KRT4P19013 MYADML-201ENST00000474610 2147 ntBASIC14.97□□□□□ -0.01
KRT4P19013 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.97□□□□□ -0.01
KRT4P19013 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 AL359183.1-201ENST00000623796 2132 ntBASIC14.97□□□□□ -0.01
KRT4P19013 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
KRT4P19013 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KRT4P19013 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KRT4P19013 AC023794.5-201ENST00000564380 2157 ntBASIC14.97□□□□□ -0.01
KRT4P19013 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.97□□□□□ -0.01
KRT4P19013 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
KRT4P19013 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
KRT4P19013 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KRT4P19013 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT4P19013 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
KRT4P19013 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
KRT4P19013 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.96□□□□□ -0.01
KRT4P19013 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KRT4P19013 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
KRT4P19013 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.96□□□□□ -0.01
KRT4P19013 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
KRT4P19013 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
KRT4P19013 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
KRT4P19013 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
KRT4P19013 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT4P19013 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.96□□□□□ -0.01
KRT4P19013 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.96□□□□□ -0.01
KRT4P19013 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms