Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC9.21□□□□□ -0.93
PDE6GP18545 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.21□□□□□ -0.93
PDE6GP18545 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC9.21□□□□□ -0.93
PDE6GP18545 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.93
PDE6GP18545 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
PDE6GP18545 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
PDE6GP18545 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.93
PDE6GP18545 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC9.21□□□□□ -0.93
PDE6GP18545 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC9.21□□□□□ -0.94
PDE6GP18545 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 ELK2BP-201ENST00000415014 1224 ntBASIC9.21□□□□□ -0.94
PDE6GP18545 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 USP36-216ENST00000589424 970 ntTSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
PDE6GP18545 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 KRT18P1-202ENST00000452408 1331 ntBASIC9.21□□□□□ -0.94
PDE6GP18545 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 RN7SL832P-201ENST00000607781 1756 ntBASIC9.21□□□□□ -0.94
PDE6GP18545 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC9.21□□□□□ -0.94
PDE6GP18545 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
PDE6GP18545 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC9.21□□□□□ -0.94
PDE6GP18545 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
PDE6GP18545 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 NCLP1-201ENST00000445357 1963 ntBASIC9.21□□□□□ -0.94
PDE6GP18545 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC9.21□□□□□ -0.94
PDE6GP18545 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
PDE6GP18545 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PDE6GP18545 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
PDE6GP18545 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PDE6GP18545 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
PDE6GP18545 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
PDE6GP18545 MRPL20P1-201ENST00000400819 433 ntBASIC9.2□□□□□ -0.94
PDE6GP18545 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDE6GP18545 AC117947.1-201ENST00000427448 529 ntBASIC9.2□□□□□ -0.94
PDE6GP18545 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC9.2□□□□□ -0.94
PDE6GP18545 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC9.2□□□□□ -0.94
PDE6GP18545 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC9.2□□□□□ -0.94
PDE6GP18545 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC9.2□□□□□ -0.94
PDE6GP18545 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC9.2□□□□□ -0.94
PDE6GP18545 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms