Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC2P18074 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC2P18074 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ERCC2P18074 SNX29P1-201ENST00000548357 1007 ntBASIC15.3■□□□□ 0.04
ERCC2P18074 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
ERCC2P18074 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 RN7SL713P-201ENST00000582127 302 ntBASIC15.3■□□□□ 0.04
ERCC2P18074 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC2P18074 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC2P18074 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC2P18074 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.3■□□□□ 0.04
ERCC2P18074 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ERCC2P18074 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ERCC2P18074 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
ERCC2P18074 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ERCC2P18074 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 AC015802.1-201ENST00000588104 1449 ntBASIC15.29■□□□□ 0.04
ERCC2P18074 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.29■□□□□ 0.04
ERCC2P18074 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.29■□□□□ 0.04
ERCC2P18074 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.29■□□□□ 0.04
ERCC2P18074 ALG3P1-201ENST00000508806 1114 ntBASIC15.29■□□□□ 0.04
ERCC2P18074 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.29■□□□□ 0.04
ERCC2P18074 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.29■□□□□ 0.04
ERCC2P18074 C2orf69P2-201ENST00000562032 1123 ntBASIC15.29■□□□□ 0.04
ERCC2P18074 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.29■□□□□ 0.04
ERCC2P18074 MIR4683-201ENST00000579659 81 ntBASIC15.29■□□□□ 0.04
ERCC2P18074 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.29■□□□□ 0.04
ERCC2P18074 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.29■□□□□ 0.04
ERCC2P18074 AC002472.3-201ENST00000640124 621 ntBASIC15.29■□□□□ 0.04
ERCC2P18074 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ERCC2P18074 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ERCC2P18074 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ERCC2P18074 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
ERCC2P18074 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.28■□□□□ 0.04
ERCC2P18074 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.28■□□□□ 0.04
ERCC2P18074 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ERCC2P18074 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.28■□□□□ 0.04
ERCC2P18074 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 AC026748.1-201ENST00000624349 3251 ntBASIC15.28■□□□□ 0.04
ERCC2P18074 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
ERCC2P18074 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ERCC2P18074 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.28■□□□□ 0.04
ERCC2P18074 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.28■□□□□ 0.04
ERCC2P18074 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.28■□□□□ 0.04
ERCC2P18074 AC104989.1-201ENST00000519711 778 ntBASIC15.28■□□□□ 0.04
ERCC2P18074 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.28■□□□□ 0.04
ERCC2P18074 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ERCC2P18074 HILS1-202ENST00000545329 423 ntBASIC15.28■□□□□ 0.04
ERCC2P18074 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.28■□□□□ 0.04
ERCC2P18074 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.28■□□□□ 0.04
ERCC2P18074 MIR6775-201ENST00000617557 69 ntBASIC15.28■□□□□ 0.04
ERCC2P18074 AP001002.3-201ENST00000623482 206 ntBASIC15.28■□□□□ 0.04
ERCC2P18074 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ERCC2P18074 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms