Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 SSR4P1-203ENST00000599569 2260 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 CICP4-201ENST00000447359 2812 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATP2A2P16615 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
ATP2A2P16615 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2A2P16615 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 AC114501.1-201ENST00000445949 172 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 TUBB8P8-201ENST00000458717 1058 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 RN7SL818P-201ENST00000485099 259 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 AC022616.1-201ENST00000518688 554 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 RN7SL725P-201ENST00000606439 259 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A2P16615 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A2P16615 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A2P16615 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A2P16615 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A2P16615 AC004899.1-201ENST00000424687 1714 ntBASIC16.48■□□□□ 0.23
ATP2A2P16615 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A2P16615 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ATP2A2P16615 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 AL157791.1-201ENST00000553667 1699 ntBASIC16.47■□□□□ 0.23
ATP2A2P16615 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A2P16615 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A2P16615 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A2P16615 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A2P16615 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A2P16615 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 COX6A1P2-201ENST00000620597 330 ntBASIC16.47■□□□□ 0.23
ATP2A2P16615 HLA-C-210ENST00000640219 976 ntBASIC16.47■□□□□ 0.23
ATP2A2P16615 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A2P16615 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ATP2A2P16615 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A2P16615 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATP2A2P16615 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATP2A2P16615 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATP2A2P16615 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A2P16615 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ATP2A2P16615 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A2P16615 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms