Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 AC018529.2-202ENST00000611482 3087 ntBASIC14.56□□□□□ -0.08
CDH1P12830 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH1P12830 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH1P12830 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH1P12830 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH1P12830 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH1P12830 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH1P12830 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDH1P12830 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDH1P12830 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH1P12830 BCRP2-202ENST00000447763 634 ntBASIC14.55□□□□□ -0.08
CDH1P12830 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH1P12830 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH1P12830 BCRP6-201ENST00000510112 632 ntBASIC14.55□□□□□ -0.08
CDH1P12830 BCRP7-201ENST00000511549 544 ntBASIC14.55□□□□□ -0.08
CDH1P12830 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.55□□□□□ -0.08
CDH1P12830 SLC25A47P1-201ENST00000531577 414 ntBASIC14.55□□□□□ -0.08
CDH1P12830 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH1P12830 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH1P12830 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH1P12830 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
CDH1P12830 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDH1P12830 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH1P12830 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDH1P12830 PTENP1-202ENST00000532280 3996 ntBASIC14.55□□□□□ -0.08
CDH1P12830 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH1P12830 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH1P12830 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDH1P12830 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH1P12830 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 AC004466.1-201ENST00000599515 1080 ntBASIC14.54□□□□□ -0.08
CDH1P12830 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH1P12830 AL603764.1-201ENST00000636452 321 ntBASIC14.54□□□□□ -0.08
CDH1P12830 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH1P12830 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH1P12830 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH1P12830 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms