Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC172P0C7W6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC172P0C7W6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCDC172P0C7W6 KRT8P22-201ENST00000562317 1415 ntBASIC16.18■□□□□ 0.18
CCDC172P0C7W6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 DFFBP1-201ENST00000433250 979 ntBASIC16.17■□□□□ 0.18
CCDC172P0C7W6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 INGX-202ENST00000489074 768 ntBASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AP001582.1-201ENST00000525856 295 ntBASIC16.17■□□□□ 0.18
CCDC172P0C7W6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC172P0C7W6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC087499.6-201ENST00000411576 835 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 GNAQP1-201ENST00000444815 1067 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 GIMAP3P-201ENST00000495150 836 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC022447.6-201ENST00000515522 438 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 RFPL4AP1-201ENST00000530883 850 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC005498.2-205ENST00000593218 784 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC006538.3-201ENST00000612495 578 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC004790.1-201ENST00000612686 536 ntBASIC16.16■□□□□ 0.18
CCDC172P0C7W6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms