Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC005740.1-201ENST00000515639 522 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.98■□□□□ 0.63
COL5A2P05997 AC092862.1-201ENST00000541534 533 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 AC145285.5-201ENST00000562217 361 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC18.98■□□□□ 0.63
COL5A2P05997 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.98■□□□□ 0.63
COL5A2P05997 AC091769.1-201ENST00000619576 568 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.98■□□□□ 0.63
COL5A2P05997 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.98■□□□□ 0.63
COL5A2P05997 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL5A2P05997 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.98■□□□□ 0.63
COL5A2P05997 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
COL5A2P05997 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 AC004554.1-201ENST00000422830 1468 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.98■□□□□ 0.63
COL5A2P05997 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
COL5A2P05997 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.98■□□□□ 0.63
COL5A2P05997 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.98■□□□□ 0.63
COL5A2P05997 AC084018.2-201ENST00000613093 2607 ntBASIC18.98■□□□□ 0.63
COL5A2P05997 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.98■□□□□ 0.63
COL5A2P05997 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL5A2P05997 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
COL5A2P05997 GEMIN8P4-201ENST00000380526 729 ntBASIC18.97■□□□□ 0.63
COL5A2P05997 AL929302.1-201ENST00000426556 871 ntBASIC18.97■□□□□ 0.63
COL5A2P05997 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 PFN2-212ENST00000490975 858 ntTSL 4 BASIC18.97■□□□□ 0.63
COL5A2P05997 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.97■□□□□ 0.63
COL5A2P05997 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 MIR5001-201ENST00000580185 100 ntBASIC18.97■□□□□ 0.63
COL5A2P05997 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
COL5A2P05997 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL5A2P05997 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 AC006987.1-201ENST00000413610 527 ntBASIC18.97■□□□□ 0.63
COL5A2P05997 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC18.97■□□□□ 0.63
COL5A2P05997 AC090136.2-201ENST00000517809 420 ntBASIC18.97■□□□□ 0.63
COL5A2P05997 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
COL5A2P05997 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.97■□□□□ 0.63
COL5A2P05997 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL5A2P05997 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.97■□□□□ 0.63
COL5A2P05997 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.96■□□□□ 0.63
COL5A2P05997 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL5A2P05997 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 CCT8L1P-201ENST00000465400 1674 ntBASIC18.96■□□□□ 0.63
COL5A2P05997 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL5A2P05997 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
COL5A2P05997 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.96■□□□□ 0.63
COL5A2P05997 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.96■□□□□ 0.63
COL5A2P05997 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.96■□□□□ 0.63
COL5A2P05997 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.96■□□□□ 0.63
COL5A2P05997 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 AC106827.1-201ENST00000366454 431 ntBASIC18.96■□□□□ 0.63
COL5A2P05997 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.96■□□□□ 0.63
COL5A2P05997 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.96■□□□□ 0.63
COL5A2P05997 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.96■□□□□ 0.63
COL5A2P05997 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.96■□□□□ 0.63
COL5A2P05997 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC18.96■□□□□ 0.63
COL5A2P05997 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL5A2P05997 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.96■□□□□ 0.63
COL5A2P05997 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
COL5A2P05997 AC005586.2-201ENST00000563946 837 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms