Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MYCNP04198 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MYCNP04198 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.69■□□□□ 0.42
MYCNP04198 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.69■□□□□ 0.42
MYCNP04198 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.69■□□□□ 0.42
MYCNP04198 AC025181.1-201ENST00000477507 416 ntBASIC17.69■□□□□ 0.42
MYCNP04198 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC17.69■□□□□ 0.42
MYCNP04198 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC17.69■□□□□ 0.42
MYCNP04198 SLED1-202ENST00000512051 380 ntBASIC17.69■□□□□ 0.42
MYCNP04198 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC17.69■□□□□ 0.42
MYCNP04198 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.69■□□□□ 0.42
MYCNP04198 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC17.69■□□□□ 0.42
MYCNP04198 AC087894.1-201ENST00000538359 518 ntBASIC17.69■□□□□ 0.42
MYCNP04198 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.69■□□□□ 0.42
MYCNP04198 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 AC073534.2-201ENST00000620377 381 ntBASIC17.69■□□□□ 0.42
MYCNP04198 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.69■□□□□ 0.42
MYCNP04198 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MYCNP04198 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
MYCNP04198 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MYCNP04198 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MYCNP04198 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.68■□□□□ 0.42
MYCNP04198 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 AL512283.1-201ENST00000606756 1384 ntBASIC17.68■□□□□ 0.42
MYCNP04198 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 HLA-A-202ENST00000376806 1854 ntBASIC17.68■□□□□ 0.42
MYCNP04198 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MYCNP04198 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 AL121972.2-202ENST00000429386 586 ntTSL 4 BASIC17.68■□□□□ 0.42
MYCNP04198 TXNL1P1-201ENST00000429528 554 ntBASIC17.68■□□□□ 0.42
MYCNP04198 AC018463.1-201ENST00000456674 917 ntBASIC17.68■□□□□ 0.42
MYCNP04198 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC17.68■□□□□ 0.42
MYCNP04198 ZNF767P-206ENST00000513792 565 ntBASIC17.68■□□□□ 0.42
MYCNP04198 NRON-201ENST00000517270 370 ntBASIC17.68■□□□□ 0.42
MYCNP04198 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC17.68■□□□□ 0.42
MYCNP04198 KRT90P-201ENST00000549264 1064 ntBASIC17.68■□□□□ 0.42
MYCNP04198 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.68■□□□□ 0.42
MYCNP04198 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.68■□□□□ 0.42
MYCNP04198 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC17.68■□□□□ 0.42
MYCNP04198 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MYCNP04198 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms