Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CICP23-201ENST00000605013 2741 ntBASIC21.64■■□□□ 1.05
RAPGEF3O95398 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.64■■□□□ 1.05
RAPGEF3O95398 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC21.64■■□□□ 1.05
RAPGEF3O95398 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RAPGEF3O95398 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.64■■□□□ 1.05
RAPGEF3O95398 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 HCG11-201ENST00000411553 5696 ntBASIC21.64■■□□□ 1.05
RAPGEF3O95398 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.64■■□□□ 1.05
RAPGEF3O95398 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAPGEF3O95398 AC138761.6-201ENST00000583997 1423 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 GOLGA6L16P-201ENST00000441780 1299 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 AC092903.1-201ENST00000466506 262 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 GPX3-202ENST00000517973 612 ntTSL 3 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 AL353622.2-201ENST00000605846 425 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 AC004466.2-201ENST00000614749 516 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 AC005274.1-201ENST00000623460 802 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPGEF3O95398 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 AP005117.1-202ENST00000581724 1908 ntBASIC21.63■■□□□ 1.05
RAPGEF3O95398 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPGEF3O95398 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 RPL14-203ENST00000416518 812 ntTSL 3 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 ANKRD26P1-203ENST00000569528 966 ntBASIC21.62■■□□□ 1.05
RAPGEF3O95398 RN7SL602P-201ENST00000578326 324 ntBASIC21.62■■□□□ 1.05
RAPGEF3O95398 RN7SL718P-201ENST00000581254 303 ntBASIC21.62■■□□□ 1.05
RAPGEF3O95398 AC006116.2-201ENST00000589958 988 ntBASIC21.62■■□□□ 1.05
RAPGEF3O95398 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 AL009176.1-201ENST00000607876 650 ntBASIC21.62■■□□□ 1.05
RAPGEF3O95398 GGNBP1-204ENST00000613113 887 ntBASIC21.62■■□□□ 1.05
RAPGEF3O95398 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPGEF3O95398 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPGEF3O95398 MROH4P-201ENST00000431302 1578 ntBASIC21.61■■□□□ 1.05
RAPGEF3O95398 AC023024.2-201ENST00000623561 1993 ntBASIC21.61■■□□□ 1.05
RAPGEF3O95398 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 AC025594.1-201ENST00000469533 543 ntBASIC21.61■■□□□ 1.05
RAPGEF3O95398 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 DLK1-205ENST00000556051 469 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPGEF3O95398 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAPGEF3O95398 AC140658.4-201ENST00000561990 352 ntBASIC21.61■■□□□ 1.05
RAPGEF3O95398 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms