Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.94□□□□□ -0.18
DKK1O94907 RPL18AP8-201ENST00000486071 528 ntBASIC13.94□□□□□ -0.18
DKK1O94907 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.94□□□□□ -0.18
DKK1O94907 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.94□□□□□ -0.18
DKK1O94907 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.94□□□□□ -0.18
DKK1O94907 HERC2P11-201ENST00000562845 725 ntBASIC13.94□□□□□ -0.18
DKK1O94907 AC100756.2-201ENST00000569537 736 ntBASIC13.94□□□□□ -0.18
DKK1O94907 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.94□□□□□ -0.18
DKK1O94907 AC055811.3-201ENST00000584952 686 ntBASIC13.94□□□□□ -0.18
DKK1O94907 AC018695.6-201ENST00000614011 534 ntBASIC13.94□□□□□ -0.18
DKK1O94907 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.94□□□□□ -0.18
DKK1O94907 AC011471.3-201ENST00000623576 402 ntBASIC13.94□□□□□ -0.18
DKK1O94907 AC002044.2-201ENST00000624910 970 ntBASIC13.94□□□□□ -0.18
DKK1O94907 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DKK1O94907 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
DKK1O94907 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 KRT8P28-201ENST00000433288 1390 ntBASIC13.94□□□□□ -0.18
DKK1O94907 WASH3P-207ENST00000560956 1394 ntBASIC13.94□□□□□ -0.18
DKK1O94907 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.94□□□□□ -0.18
DKK1O94907 REXO1L2P-201ENST00000425429 2069 ntBASIC13.94□□□□□ -0.18
DKK1O94907 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DKK1O94907 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DKK1O94907 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.93□□□□□ -0.18
DKK1O94907 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DKK1O94907 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DKK1O94907 ST13P19-201ENST00000442505 1124 ntBASIC13.93□□□□□ -0.18
DKK1O94907 ERP29P1-201ENST00000442902 706 ntBASIC13.93□□□□□ -0.18
DKK1O94907 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.93□□□□□ -0.18
DKK1O94907 FAM86B3P-203ENST00000523992 854 ntBASIC13.93□□□□□ -0.18
DKK1O94907 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.93□□□□□ -0.18
DKK1O94907 EIF5AP2-201ENST00000585668 1047 ntBASIC13.93□□□□□ -0.18
DKK1O94907 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 AC148477.9-201ENST00000623974 539 ntBASIC13.93□□□□□ -0.18
DKK1O94907 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 AC092384.3-202ENST00000564646 2873 ntBASIC13.93□□□□□ -0.18
DKK1O94907 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
DKK1O94907 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.93□□□□□ -0.18
DKK1O94907 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.93□□□□□ -0.18
DKK1O94907 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DKK1O94907 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.92□□□□□ -0.18
DKK1O94907 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DKK1O94907 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DKK1O94907 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DKK1O94907 AL672207.1-201ENST00000328462 1570 ntBASIC13.92□□□□□ -0.18
DKK1O94907 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DKK1O94907 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DKK1O94907 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DKK1O94907 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms