Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.57□□□□□ -0.56
PDE6DO43924 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.57□□□□□ -0.56
PDE6DO43924 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
PDE6DO43924 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.57□□□□□ -0.56
PDE6DO43924 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.57□□□□□ -0.56
PDE6DO43924 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.57□□□□□ -0.56
PDE6DO43924 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.57□□□□□ -0.56
PDE6DO43924 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
PDE6DO43924 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
PDE6DO43924 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.57□□□□□ -0.56
PDE6DO43924 BCAR1-209ENST00000546196 1340 ntBASIC11.57□□□□□ -0.56
PDE6DO43924 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
PDE6DO43924 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
PDE6DO43924 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
PDE6DO43924 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 MYADML-201ENST00000474610 2147 ntBASIC11.56□□□□□ -0.56
PDE6DO43924 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.56□□□□□ -0.56
PDE6DO43924 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.56□□□□□ -0.56
PDE6DO43924 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.56□□□□□ -0.56
PDE6DO43924 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 AC072061.1-201ENST00000569710 2234 ntBASIC11.56□□□□□ -0.56
PDE6DO43924 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PDE6DO43924 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.56□□□□□ -0.56
PDE6DO43924 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
PDE6DO43924 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms