Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A2O43868 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC28A2O43868 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 C1QBPP1-201ENST00000400117 770 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A2O43868 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A2O43868 RPL13P2-201ENST00000440687 659 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 MAGEA5-201ENST00000446757 942 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.43□□□□□ -0.1
SLC28A2O43868 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 MIR4741-201ENST00000579822 90 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 AC104982.3-201ENST00000581995 514 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 MIR4750-201ENST00000584564 56 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.43□□□□□ -0.1
SLC28A2O43868 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A2O43868 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.43□□□□□ -0.1
SLC28A2O43868 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC28A2O43868 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A2O43868 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A2O43868 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A2O43868 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A2O43868 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC28A2O43868 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 ST20-AS1-201ENST00000560255 4223 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A2O43868 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 ACE3P-201ENST00000423435 1973 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC28A2O43868 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A2O43868 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 AL355334.1-201ENST00000417713 215 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 FTLP1-201ENST00000449155 526 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 KRT18P43-201ENST00000469825 1281 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 AC008267.1-201ENST00000474858 1069 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 RN7SL818P-201ENST00000485099 259 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 AC124283.3-201ENST00000570869 594 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.42□□□□□ -0.1
SLC28A2O43868 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A2O43868 NDUFV2P1-201ENST00000596415 907 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 RN7SL725P-201ENST00000606439 259 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 AC025181.2-201ENST00000606994 802 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 AL391069.4-201ENST00000609583 481 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A2O43868 CU633904.3-201ENST00000624042 1029 ntBASIC14.42□□□□□ -0.1
SLC28A2O43868 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A2O43868 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A2O43868 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A2O43868 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms