Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC15.4■□□□□ 0.06
TNRC18O15417 uc_338.24-201ENST00000617802 182 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
TNRC18O15417 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TNRC18O15417 AC009093.10-201ENST00000641956 1442 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNRC18O15417 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TNRC18O15417 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNRC18O15417 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TNRC18O15417 AC068880.1-201ENST00000507289 2297 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNRC18O15417 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.4■□□□□ 0.06
TNRC18O15417 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TNRC18O15417 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNRC18O15417 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNRC18O15417 AC139712.1-201ENST00000378256 1875 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TNRC18O15417 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.4■□□□□ 0.06
TNRC18O15417 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNRC18O15417 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNRC18O15417 KHSRPP1-201ENST00000427983 1768 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 FAM90A27P-201ENST00000593323 1370 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 FAM90A28P-202ENST00000597191 1374 ntBASIC15.4■□□□□ 0.06
TNRC18O15417 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.39■□□□□ 0.06
TNRC18O15417 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.39■□□□□ 0.05
TNRC18O15417 RBMX2P5-201ENST00000424312 969 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TNRC18O15417 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC15.39■□□□□ 0.05
TNRC18O15417 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.39■□□□□ 0.05
TNRC18O15417 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 AC092115.1-201ENST00000566277 1402 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.39■□□□□ 0.05
TNRC18O15417 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC15.39■□□□□ 0.05
TNRC18O15417 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC15.39■□□□□ 0.05
TNRC18O15417 AL031058.1-201ENST00000561592 888 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC15.39■□□□□ 0.05
TNRC18O15417 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC15.39■□□□□ 0.05
TNRC18O15417 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC15.39■□□□□ 0.05
TNRC18O15417 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TNRC18O15417 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TNRC18O15417 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 HSD3BP1-201ENST00000286193 1111 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC15.39■□□□□ 0.05
TNRC18O15417 MIR5091-201ENST00000578707 93 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 MIR4265-201ENST00000582152 99 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 MIR6741-201ENST00000618782 63 ntBASIC15.39■□□□□ 0.05
TNRC18O15417 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TNRC18O15417 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TNRC18O15417 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.38■□□□□ 0.05
TNRC18O15417 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC15.38■□□□□ 0.05
TNRC18O15417 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TNRC18O15417 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TNRC18O15417 AL139424.2-202ENST00000641335 1369 ntBASIC15.38■□□□□ 0.05
TNRC18O15417 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 KLK8-203ENST00000347619 555 ntTSL 2 BASIC15.38■□□□□ 0.05
TNRC18O15417 U3.5-201ENST00000363448 216 ntBASIC15.38■□□□□ 0.05
TNRC18O15417 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC15.38■□□□□ 0.05
TNRC18O15417 AC073465.1-201ENST00000456671 464 ntBASIC15.38■□□□□ 0.05
TNRC18O15417 AC145285.1-201ENST00000469929 694 ntBASIC15.38■□□□□ 0.05
TNRC18O15417 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.38■□□□□ 0.05
TNRC18O15417 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
TNRC18O15417 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 AC106872.9-201ENST00000512437 1393 ntBASIC15.38■□□□□ 0.05
TNRC18O15417 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.38■□□□□ 0.05
TNRC18O15417 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 RN7SL76P-201ENST00000482435 289 ntBASIC15.38■□□□□ 0.05
TNRC18O15417 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC15.38■□□□□ 0.05
TNRC18O15417 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.38■□□□□ 0.05
TNRC18O15417 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TNRC18O15417 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms