Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 AL591846.1-201ENST00000451736 433 ntBASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 AC145423.3-201ENST00000615987 467 ntBASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 LINC00552-201ENST00000625151 2579 ntBASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 AHCYP2-201ENST00000430630 1300 ntBASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 AC140479.7-201ENST00000636301 2332 ntBASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHB1Q9Y5F3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PCDHB1Q9Y5F3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms