Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AL121723.1-201ENST00000445194 1519 ntBASIC14.12□□□□□ -0.15
AP4S1Q9Y587 UXT-AS1-201ENST00000590504 1525 ntBASIC14.12□□□□□ -0.15
AP4S1Q9Y587 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC079140.1-201ENST00000508039 487 ntBASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC084121.4-201ENST00000641598 221 ntBASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AF228730.8-201ENST00000642140 221 ntBASIC14.12□□□□□ -0.15
AP4S1Q9Y587 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC090643.2-201ENST00000623442 2029 ntBASIC14.12□□□□□ -0.15
AP4S1Q9Y587 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 Z97205.2-201ENST00000564697 1639 ntBASIC14.12□□□□□ -0.15
AP4S1Q9Y587 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AC011840.2-201ENST00000563063 1520 ntBASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AC015922.1-201ENST00000421102 1152 ntBASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AC026120.1-201ENST00000611536 926 ntBASIC14.11□□□□□ -0.15
AP4S1Q9Y587 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AC091812.2-201ENST00000619081 385 ntBASIC14.11□□□□□ -0.15
AP4S1Q9Y587 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AL137783.1-201ENST00000623494 1896 ntBASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
AP4S1Q9Y587 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 CES1P1-201ENST00000421606 1704 ntBASIC14.1□□□□□ -0.15
AP4S1Q9Y587 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
AP4S1Q9Y587 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms