Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 FAM58BP-201ENST00000439056 645 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 BX284668.4-201ENST00000453917 508 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 ALG3P1-201ENST00000508806 1114 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 RN7SL163P-201ENST00000583100 276 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AC132192.2-201ENST00000596206 1147 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 BNIP3P13-201ENST00000599968 566 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 BX088702.1-201ENST00000610784 235 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AC022748.3-201ENST00000621828 275 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AC004923.1-202ENST00000642106 209 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 LINC01101-201ENST00000622953 1884 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AC004899.1-201ENST00000424687 1714 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 CICP23-201ENST00000605013 2741 ntBASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00588Q9Y4M8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 AC007326.2-201ENST00000624224 7579 ntBASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 DPM3-202ENST00000368399 517 ntBASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 PUDPP3-201ENST00000445368 636 ntBASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 HIST2H2BC-201ENST00000498492 580 ntBASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00588Q9Y4M8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms