Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 AC092638.2-201ENST00000441105 947 ntBASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 RGS5-216ENST00000449680 788 ntTSL 3 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 AC018638.5-201ENST00000450885 754 ntBASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 KLF17P1-201ENST00000547105 1126 ntBASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 MIR3180-2-201ENST00000581748 88 ntBASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 RN7SL470P-201ENST00000583069 259 ntBASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHANK2Q9UPX8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 AC006372.4-201ENST00000624122 1543 ntBASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 PAUPAR-201ENST00000630360 2965 ntBASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 ALG1L6P-201ENST00000515248 758 ntBASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 IGHV1-12-201ENST00000518307 205 ntBASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 OR5BD1P-201ENST00000532527 817 ntBASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 TEKT4P2-202ENST00000559466 1312 ntBASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SHANK2Q9UPX8 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 BX679664.3-201ENST00000414070 555 ntBASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 AC113935.1-201ENST00000471722 555 ntBASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 CR383656.3-201ENST00000551315 183 ntBASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 AC068867.1-201ENST00000559855 150 ntBASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 FES-204ENST00000414248 2327 ntTSL 2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SHANK2Q9UPX8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms