Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
ZC3H4Q9UPT8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
ZC3H4Q9UPT8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZC3H4Q9UPT8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.77■□□□□ 0.43
ZC3H4Q9UPT8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZC3H4Q9UPT8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZC3H4Q9UPT8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.77■□□□□ 0.43
ZC3H4Q9UPT8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 MIR566-201ENST00000385187 94 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 AC004522.1-201ENST00000419978 654 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 OR2R1P-201ENST00000441404 914 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 AC106047.2-201ENST00000511723 743 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 AC226150.1-201ENST00000544259 466 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 ABHD17AP9-201ENST00000561925 548 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 AC010632.2-201ENST00000588369 1224 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 CYP4F36P-201ENST00000589193 186 ntBASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
ZC3H4Q9UPT8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AF274858.1-201ENST00000406288 372 ntBASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 GCOM2-201ENST00000509133 1104 ntBASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 OR5BD1P-201ENST00000532527 817 ntBASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AC003686.1-201ENST00000550956 1034 ntBASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.75■□□□□ 0.43
ZC3H4Q9UPT8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms