Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SYNPO2Q9UMS6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 TBC1D3J-201ENST00000620719 1426 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 LAP3P2-201ENST00000454686 1454 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 RNA5SP359-201ENST00000364838 113 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC026320.2-201ENST00000434379 478 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC019193.1-201ENST00000506678 823 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC008723.1-201ENST00000506922 207 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC140658.4-201ENST00000561990 352 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC023824.1-201ENST00000562945 2975 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 RN7SL190P-201ENST00000582519 257 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC064801.2-201ENST00000625052 1303 ntBASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.89■□□□□ 0.29
SYNPO2Q9UMS6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 KRT8P31-201ENST00000504812 1408 ntBASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 LINC00554-201ENST00000564841 3011 ntBASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 AC026316.1-201ENST00000398900 414 ntBASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 BANF1P3-201ENST00000412556 261 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms