Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS29Q9UBQ0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 MSTO2P-201ENST00000314835 1709 ntBASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 AC131206.1-201ENST00000538078 1211 ntBASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 AC145423.3-201ENST00000615987 467 ntBASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VPS29Q9UBQ0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 AC136759.1-202ENST00000530858 2194 ntBASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
VPS29Q9UBQ0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 MYADML-201ENST00000474610 2147 ntBASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS29Q9UBQ0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms