Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 BX284668.4-201ENST00000453917 508 ntBASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 AKR7A2P1-201ENST00000460134 915 ntBASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 BNIP3P13-201ENST00000599968 566 ntBASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 AC008825.2-201ENST00000603374 718 ntBASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMG20BQ9P0W2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 FNTAP2-201ENST00000430308 634 ntBASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC021723.1-201ENST00000486306 515 ntBASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC100827.2-201ENST00000563214 1194 ntBASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC005324.6-201ENST00000587972 613 ntBASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC132192.2-201ENST00000596206 1147 ntBASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC244452.3-201ENST00000636814 210 ntBASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 MTHFR-210ENST00000641407 2387 ntBASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.03■□□□□ 0.48
HMG20BQ9P0W2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 AC138028.6-201ENST00000616106 1482 ntBASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 DPM3-202ENST00000368399 517 ntBASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 HIST2H2BC-201ENST00000498492 580 ntBASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 AL023803.2-201ENST00000620080 638 ntBASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 AC140479.7-201ENST00000636301 2332 ntBASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HMG20BQ9P0W2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms