Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AL353622.1-201ENST00000604716 1945 ntBASIC17.82■□□□□ 0.44
RTN4Q9NQC3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AC148477.8-201ENST00000624298 468 ntBASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AC027348.2-201ENST00000624375 642 ntBASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AC023090.2-201ENST00000625182 2110 ntBASIC17.82■□□□□ 0.44
RTN4Q9NQC3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AL513497.1-201ENST00000624273 2083 ntBASIC17.82■□□□□ 0.44
RTN4Q9NQC3 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 TXNL4B-202ENST00000423037 2490 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN4Q9NQC3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 SEC63P1-201ENST00000425785 1258 ntBASIC17.81■□□□□ 0.44
RTN4Q9NQC3 KRT18P67-201ENST00000432816 1264 ntBASIC17.81■□□□□ 0.44
RTN4Q9NQC3 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.81■□□□□ 0.44
RTN4Q9NQC3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 AP001002.2-201ENST00000625137 386 ntBASIC17.81■□□□□ 0.44
RTN4Q9NQC3 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
RTN4Q9NQC3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTN4Q9NQC3 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 303.9 ms