Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 AC105021.1-202ENST00000570572 669 ntBASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 AC055717.3-201ENST00000622967 595 ntBASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 MAPK10-262ENST00000641051 5738 ntBASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SND1-IT1Q9HBX3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 MED15P5-201ENST00000423150 992 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 HIST3H2BA-201ENST00000436555 524 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AL592309.1-201ENST00000443127 649 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 KRT18P3-201ENST00000451602 1288 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 SLED1-202ENST00000512051 380 ntBASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.03□□□□□ -0.8
SND1-IT1Q9HBX3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms