Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC012617.1-204ENST00000586340 2305 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC093525.8-201ENST00000624099 1342 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC097376.2-205ENST00000610159 5334 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC002472.2-201ENST00000442739 958 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 GAPDHP21-201ENST00000450301 1010 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 RN7SL204P-201ENST00000582831 262 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC004840.1-201ENST00000636359 365 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC015818.8-201ENST00000587907 1519 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 CLK3P2-201ENST00000427566 1453 ntBASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.98□□□□□ -0.17
AMBRA1Q9C0C7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 AL158070.2-201ENST00000623713 1621 ntBASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 AGGF1P1-201ENST00000509500 2073 ntBASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 AL359881.2-201ENST00000602973 570 ntBASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms