Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH11YQ9BZA8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 BAK1P1-201ENST00000317045 636 ntBASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 AC141586.1-203ENST00000567242 366 ntBASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 MIR5196-201ENST00000578146 115 ntBASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 AC005357.2-202ENST00000590507 1060 ntBASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH11YQ9BZA8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 AC015688.4-201ENST00000580780 1647 ntBASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 RN7SKP109-201ENST00000410592 316 ntBASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 OR8T1P-201ENST00000421347 918 ntBASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 HERC2P11-201ENST00000562845 725 ntBASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 AC100756.2-201ENST00000569537 736 ntBASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 SIGLEC22P-201ENST00000599104 714 ntBASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDH11YQ9BZA8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH11YQ9BZA8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms