Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.11■□□□□ 0.33
ARID3AQ99856 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARID3AQ99856 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ARID3AQ99856 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 MROH4P-201ENST00000431302 1578 ntBASIC17.11■□□□□ 0.33
ARID3AQ99856 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
ARID3AQ99856 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ARID3AQ99856 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ARID3AQ99856 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.1■□□□□ 0.33
ARID3AQ99856 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.1■□□□□ 0.33
ARID3AQ99856 TREML5P-201ENST00000421694 576 ntBASIC17.1■□□□□ 0.33
ARID3AQ99856 AC092580.3-201ENST00000430932 139 ntBASIC17.1■□□□□ 0.33
ARID3AQ99856 AC244107.1-201ENST00000442033 332 ntBASIC17.1■□□□□ 0.33
ARID3AQ99856 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ARID3AQ99856 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.1■□□□□ 0.33
ARID3AQ99856 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.1■□□□□ 0.33
ARID3AQ99856 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.1■□□□□ 0.33
ARID3AQ99856 MIR4313-201ENST00000580760 101 ntBASIC17.1■□□□□ 0.33
ARID3AQ99856 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.1■□□□□ 0.33
ARID3AQ99856 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 CETN4P-206ENST00000642099 2168 ntBASIC17.1■□□□□ 0.33
ARID3AQ99856 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 KRT8P12-202ENST00000472924 1397 ntBASIC17.1■□□□□ 0.33
ARID3AQ99856 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
ARID3AQ99856 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
ARID3AQ99856 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARID3AQ99856 HSPA7-201ENST00000445535 1927 ntBASIC17.09■□□□□ 0.33
ARID3AQ99856 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.09■□□□□ 0.33
ARID3AQ99856 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 CYMP-203ENST00000474680 1263 ntBASIC17.09■□□□□ 0.33
ARID3AQ99856 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.09■□□□□ 0.33
ARID3AQ99856 HNRNPUP1-201ENST00000554987 333 ntBASIC17.09■□□□□ 0.33
ARID3AQ99856 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ARID3AQ99856 AC140878.1-201ENST00000565277 250 ntBASIC17.09■□□□□ 0.33
ARID3AQ99856 TEX28P1-201ENST00000613479 1221 ntBASIC17.09■□□□□ 0.33
ARID3AQ99856 TEX28P2-201ENST00000617764 1221 ntBASIC17.09■□□□□ 0.33
ARID3AQ99856 AC093512.1-201ENST00000617969 520 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms