Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.02■□□□□ 0.64
ABCA3Q99758 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC19.02■□□□□ 0.63
ABCA3Q99758 MIR4265-201ENST00000582152 99 ntBASIC19.02■□□□□ 0.63
ABCA3Q99758 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC19.02■□□□□ 0.63
ABCA3Q99758 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC19.02■□□□□ 0.63
ABCA3Q99758 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC19.02■□□□□ 0.63
ABCA3Q99758 AC139713.2-207ENST00000641556 1292 ntBASIC19.02■□□□□ 0.63
ABCA3Q99758 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ABCA3Q99758 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ABCA3Q99758 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ABCA3Q99758 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ABCA3Q99758 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCA3Q99758 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCA3Q99758 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCA3Q99758 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ABCA3Q99758 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 NHP2P1-201ENST00000335274 462 ntBASIC19.01■□□□□ 0.63
ABCA3Q99758 SIRPB3P-201ENST00000340424 1216 ntBASIC19.01■□□□□ 0.63
ABCA3Q99758 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.01■□□□□ 0.63
ABCA3Q99758 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC19.01■□□□□ 0.63
ABCA3Q99758 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.01■□□□□ 0.63
ABCA3Q99758 AC078814.4-201ENST00000546650 327 ntBASIC19.01■□□□□ 0.63
ABCA3Q99758 BATF-202ENST00000555504 361 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCA3Q99758 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCA3Q99758 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ABCA3Q99758 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCA3Q99758 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCA3Q99758 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCA3Q99758 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCA3Q99758 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCA3Q99758 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC19■□□□□ 0.63
ABCA3Q99758 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ABCA3Q99758 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19■□□□□ 0.63
ABCA3Q99758 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC19■□□□□ 0.63
ABCA3Q99758 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 HNRNPA1P5-201ENST00000558213 966 ntBASIC19■□□□□ 0.63
ABCA3Q99758 AC142086.5-202ENST00000562500 217 ntBASIC19■□□□□ 0.63
ABCA3Q99758 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC19■□□□□ 0.63
ABCA3Q99758 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC19■□□□□ 0.63
ABCA3Q99758 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC19■□□□□ 0.63
ABCA3Q99758 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19■□□□□ 0.63
ABCA3Q99758 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC19■□□□□ 0.63
ABCA3Q99758 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC19■□□□□ 0.63
ABCA3Q99758 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC19■□□□□ 0.63
ABCA3Q99758 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC19■□□□□ 0.63
ABCA3Q99758 GALP-202ENST00000440823 889 ntTSL 5 BASIC19■□□□□ 0.63
ABCA3Q99758 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC19■□□□□ 0.63
ABCA3Q99758 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
ABCA3Q99758 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCA3Q99758 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC19■□□□□ 0.63
ABCA3Q99758 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19■□□□□ 0.63
ABCA3Q99758 LTB4R2-202ENST00000528054 3092 ntBASIC18.99■□□□□ 0.63
ABCA3Q99758 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCA3Q99758 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCA3Q99758 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCA3Q99758 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCA3Q99758 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCA3Q99758 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms