Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 RPL8P2-201ENST00000430538 502 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC026320.2-201ENST00000434379 478 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC098935.1-201ENST00000446057 611 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 IGHV3-37-201ENST00000518544 340 ntBASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RN7SL736P-201ENST00000613111 269 ntBASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 AL353726.2-201ENST00000623259 884 ntBASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 AC073911.3-201ENST00000624401 631 ntBASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 HTR7P1-202ENST00000624664 4411 ntBASIC17.09■□□□□ 0.33
CDK5RAP2Q96SN8 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 AC074138.1-201ENST00000611182 1303 ntBASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 EEF1DP2-201ENST00000433698 843 ntBASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 CHCHD2P9-201ENST00000461726 456 ntBASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 ALG1L13P-202ENST00000519320 584 ntBASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP2Q96SN8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP2Q96SN8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 PPP1R2P4-201ENST00000424051 595 ntBASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 AC107464.3-201ENST00000609172 737 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms