Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 RNVU1-8-201ENST00000364272 125 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 KRT8P6-201ENST00000399259 1207 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AC020922.4-201ENST00000621389 339 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AC012508.2-201ENST00000567613 1472 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 DKKL1P1-201ENST00000400550 698 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 CDCA4P4-201ENST00000435216 680 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 RPL18AP8-201ENST00000486071 528 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 FBXO36P1-201ENST00000579006 471 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 AC007686.3-201ENST00000619017 3487 ntBASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.35□□□□□ -0.43
CSMD1Q96PZ7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AC006504.5-208ENST00000588784 2401 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 RN7SL582P-201ENST00000491078 279 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AC090136.2-201ENST00000517809 420 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 NEK4P3-201ENST00000604859 544 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AP005117.1-202ENST00000581724 1908 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 GGTLC4P-201ENST00000402176 664 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 RHOQP2-201ENST00000449922 579 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 SCARNA12-201ENST00000459155 270 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 RN7SL357P-201ENST00000581065 298 ntBASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.34□□□□□ -0.43
CSMD1Q96PZ7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 339.1 ms