Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CCDC7Q96M83 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.59■□□□□ 0.89
CCDC7Q96M83 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC7Q96M83 AC016629.1-201ENST00000596579 586 ntBASIC20.59■□□□□ 0.89
CCDC7Q96M83 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC7Q96M83 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC7Q96M83 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CCDC7Q96M83 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 ADK-205ENST00000539909 1866 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC7Q96M83 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC7Q96M83 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC7Q96M83 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 MIR3619-201ENST00000579667 83 ntBASIC20.58■□□□□ 0.88
CCDC7Q96M83 PPY2P-201ENST00000582808 702 ntBASIC20.58■□□□□ 0.88
CCDC7Q96M83 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC7Q96M83 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC7Q96M83 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 AC215219.1-201ENST00000400706 1817 ntBASIC20.57■□□□□ 0.88
CCDC7Q96M83 AC152010.1-201ENST00000415779 2006 ntBASIC20.57■□□□□ 0.88
CCDC7Q96M83 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 NID2-208ENST00000617139 3827 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC7Q96M83 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 ZACNP1-201ENST00000612259 710 ntBASIC20.57■□□□□ 0.88
CCDC7Q96M83 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.57■□□□□ 0.88
CCDC7Q96M83 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 GSN-209ENST00000449733 2702 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC7Q96M83 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC7Q96M83 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC7Q96M83 HIST2H2BB-201ENST00000449108 381 ntBASIC20.56■□□□□ 0.88
CCDC7Q96M83 UPF3AP2-201ENST00000457924 1132 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms