Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 Z82170.1-201ENST00000625081 3192 ntBASIC13.04□□□□□ -0.32
CPNE2Q96FN4 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AC044860.1-202ENST00000559481 777 ntBASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AL158212.4-201ENST00000624062 1286 ntBASIC13.04□□□□□ -0.32
CPNE2Q96FN4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 MTHFR-210ENST00000641407 2387 ntBASIC13.04□□□□□ -0.32
CPNE2Q96FN4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 AC018529.2-202ENST00000611482 3087 ntBASIC13.04□□□□□ -0.32
CPNE2Q96FN4 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.04□□□□□ -0.32
CPNE2Q96FN4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 AL139400.1-201ENST00000366220 510 ntBASIC13.03□□□□□ -0.32
CPNE2Q96FN4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 AC241585.1-201ENST00000433527 519 ntBASIC13.03□□□□□ -0.32
CPNE2Q96FN4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 AC109322.1-201ENST00000524499 1264 ntBASIC13.03□□□□□ -0.32
CPNE2Q96FN4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.03□□□□□ -0.32
CPNE2Q96FN4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms