Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PYY2-201ENST00000315776 282 ntBASIC17.7■□□□□ 0.42
SNED1Q8TER0 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 AC018638.5-201ENST00000450885 754 ntBASIC17.7■□□□□ 0.42
SNED1Q8TER0 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.7■□□□□ 0.42
SNED1Q8TER0 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 AC011471.3-201ENST00000623576 402 ntBASIC17.7■□□□□ 0.42
SNED1Q8TER0 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.7■□□□□ 0.42
SNED1Q8TER0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNED1Q8TER0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 AC108734.2-201ENST00000420887 1069 ntBASIC17.69■□□□□ 0.42
SNED1Q8TER0 HERC2P11-201ENST00000562845 725 ntBASIC17.69■□□□□ 0.42
SNED1Q8TER0 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 AC100756.2-201ENST00000569537 736 ntBASIC17.69■□□□□ 0.42
SNED1Q8TER0 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 SIGLEC22P-201ENST00000599104 714 ntBASIC17.69■□□□□ 0.42
SNED1Q8TER0 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 AL136172.1-201ENST00000598590 1394 ntBASIC17.69■□□□□ 0.42
SNED1Q8TER0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 AC006504.5-208ENST00000588784 2401 ntBASIC17.69■□□□□ 0.42
SNED1Q8TER0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNED1Q8TER0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNED1Q8TER0 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 AC006372.4-201ENST00000624122 1543 ntBASIC17.68■□□□□ 0.42
SNED1Q8TER0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 IGHV1-12-201ENST00000518307 205 ntBASIC17.68■□□□□ 0.42
SNED1Q8TER0 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 AC090386.2-201ENST00000623010 1039 ntBASIC17.68■□□□□ 0.42
SNED1Q8TER0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.68■□□□□ 0.42
SNED1Q8TER0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNED1Q8TER0 AC022532.1-201ENST00000624563 1728 ntBASIC17.68■□□□□ 0.42
SNED1Q8TER0 LINC00528-201ENST00000600723 2160 ntBASIC17.68■□□□□ 0.42
SNED1Q8TER0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms