Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHKBP1Q8TBC3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 KRT8P19-201ENST00000551916 1455 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 ELK2AP-201ENST00000392510 1007 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 ACTG1P2-201ENST00000415776 1125 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 ACTG1P11-201ENST00000425411 1125 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC011742.3-201ENST00000439053 820 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 DUX4L46-201ENST00000566845 751 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC068587.8-201ENST00000641239 219 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC087481.3-201ENST00000602886 1894 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 AC008132.1-202ENST00000342005 1389 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 LILRP1-201ENST00000444199 1370 ntBASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHKBP1Q8TBC3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 AL133466.1-201ENST00000447582 150 ntBASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.59■□□□□ 0.09
SHKBP1Q8TBC3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms