Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 RN7SL399P-201ENST00000471648 279 ntBASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 FAM86LP-201ENST00000478302 853 ntBASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 AC055876.2-201ENST00000531834 546 ntBASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 AC025181.2-201ENST00000606994 802 ntBASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.2■□□□□ 0.02
CFAP61Q8NHU2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 DFFBP1-201ENST00000433250 979 ntBASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 AC104596.2-201ENST00000512793 793 ntBASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 CHCHD2P3-201ENST00000603038 451 ntBASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 CICP20-201ENST00000443330 2801 ntBASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CFAP61Q8NHU2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 AL591122.2-201ENST00000624125 1853 ntBASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms