Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL645728.2-202ENST00000641679 227 ntBASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AL138709.1-201ENST00000614840 1693 ntBASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC33Q8N5R6 AHCYP2-201ENST00000430630 1300 ntBASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 RNU1-114P-201ENST00000365297 166 ntBASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC33Q8N5R6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 Z93015.1-201ENST00000451718 390 ntBASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 AL022328.3-201ENST00000607943 679 ntBASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 AC132938.4-201ENST00000623835 848 ntBASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC33Q8N5R6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms