Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 OR2I1P-209ENST00000641730 5365 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 CSF2RBP1-201ENST00000447905 391 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 KRT223P-202ENST00000449164 1292 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AC106820.3-201ENST00000561653 397 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AC133552.6-201ENST00000613406 534 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 MIR6805-201ENST00000615055 62 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 COX11-210ENST00000639671 696 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AHCYP2-201ENST00000430630 1300 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 AC140479.7-201ENST00000636301 2332 ntBASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC82Q8N4S0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 COX5BP1-201ENST00000507622 393 ntBASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 MIR4683-201ENST00000579659 81 ntBASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 AL008721.1-201ENST00000609964 604 ntBASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 AL138725.1-201ENST00000407347 1314 ntBASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC82Q8N4S0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms