Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 TIMM17BP1-201ENST00000545713 516 ntBASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 AC011840.2-201ENST00000563063 1520 ntBASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRTM1Q86UE6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AL138799.1-201ENST00000448213 1675 ntBASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AC092364.2-202ENST00000597012 1073 ntBASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AL121894.2-201ENST00000602977 491 ntBASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LRRTM1Q86UE6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 CLK3P2-201ENST00000427566 1453 ntBASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 CR383656.2-201ENST00000548656 2254 ntBASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LRRTM1Q86UE6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRTM1Q86UE6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms