Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 CYP2T1P-202ENST00000641596 2535 ntBASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.62■□□□□ 0.57
PTF1AQ7RTS3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 AF274858.1-201ENST00000406288 372 ntBASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 PGAM1P11-201ENST00000416729 680 ntBASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 RN7SL375P-201ENST00000492442 298 ntBASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 NDUFB10P1-201ENST00000567319 521 ntBASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 AP000769.1-203ENST00000637245 208 ntBASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.61■□□□□ 0.57
PTF1AQ7RTS3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 C18orf15-201ENST00000623680 2534 ntBASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTF1AQ7RTS3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 NHP2P1-201ENST00000335274 462 ntBASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.59■□□□□ 0.57
PTF1AQ7RTS3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms