Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.54□□□□□ -0.24
SHFQ7M4L6 CICP16-201ENST00000502609 2813 ntBASIC13.54□□□□□ -0.24
SHFQ7M4L6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHFQ7M4L6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHFQ7M4L6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHFQ7M4L6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SHFQ7M4L6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC130686.1-201ENST00000622936 2466 ntBASIC13.53□□□□□ -0.24
SHFQ7M4L6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC016397.2-201ENST00000624848 1985 ntBASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC044860.1-202ENST00000559481 777 ntBASIC13.53□□□□□ -0.24
SHFQ7M4L6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AL158211.3-201ENST00000607385 239 ntBASIC13.53□□□□□ -0.24
SHFQ7M4L6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.53□□□□□ -0.24
SHFQ7M4L6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHFQ7M4L6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHFQ7M4L6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.52□□□□□ -0.24
SHFQ7M4L6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
SHFQ7M4L6 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHFQ7M4L6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.52□□□□□ -0.24
SHFQ7M4L6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.52□□□□□ -0.24
SHFQ7M4L6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SHFQ7M4L6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHFQ7M4L6 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHFQ7M4L6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SHFQ7M4L6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SHFQ7M4L6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.52□□□□□ -0.25
SHFQ7M4L6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.52□□□□□ -0.25
SHFQ7M4L6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 AC092337.1-201ENST00000568699 1129 ntBASIC13.52□□□□□ -0.25
SHFQ7M4L6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.52□□□□□ -0.25
SHFQ7M4L6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHFQ7M4L6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms