Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 AC026954.1-201ENST00000429771 1293 ntBASIC15.67■□□□□ 0.1
RNF43Q68DV7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 DUX4L45-201ENST00000566406 1057 ntBASIC15.67■□□□□ 0.1
RNF43Q68DV7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 AL022328.3-201ENST00000607943 679 ntBASIC15.67■□□□□ 0.1
RNF43Q68DV7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF43Q68DV7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNF43Q68DV7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 AC027601.5-201ENST00000624065 2482 ntBASIC15.66■□□□□ 0.1
RNF43Q68DV7 CALR4P-201ENST00000431943 946 ntBASIC15.66■□□□□ 0.1
RNF43Q68DV7 FAM197Y7-201ENST00000432892 766 ntBASIC15.66■□□□□ 0.1
RNF43Q68DV7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 AL021578.1-201ENST00000613646 709 ntBASIC15.66■□□□□ 0.1
RNF43Q68DV7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 PCDHA3-202ENST00000532566 4594 ntBASIC15.66■□□□□ 0.1
RNF43Q68DV7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.66■□□□□ 0.1
RNF43Q68DV7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF43Q68DV7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RNF43Q68DV7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF43Q68DV7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF43Q68DV7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms