Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 AC008972.2-201ENST00000606587 494 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 HMGB1P24-201ENST00000611897 328 ntBASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 AMT-256ENST00000638063 1783 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC42BPAQ5VT25 FUCA1P1-201ENST00000374476 1351 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 ODCP-201ENST00000459650 1639 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 NME4-203ENST00000397722 1232 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 OR52M2P-201ENST00000414298 959 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 GRPEL2P1-201ENST00000453145 339 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 STK24P1-201ENST00000455035 1291 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 RN7SL556P-201ENST00000582856 298 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 AP005264.5-201ENST00000590066 467 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 SARS-202ENST00000369923 1882 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 AC026470.1-201ENST00000478038 846 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 RN7SL767P-201ENST00000493013 295 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 AC055811.3-201ENST00000584952 686 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 EIF5AP2-201ENST00000585668 1047 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 AC006483.2-201ENST00000609813 515 ntBASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 ETV2-207ENST00000619399 994 ntTSL 5 BASIC21.75■■□□□ 1.07
CDC42BPAQ5VT25 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 GEMIN8P4-201ENST00000380526 729 ntBASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 VENTXP3-201ENST00000546480 773 ntBASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 AC018529.2-202ENST00000611482 3087 ntBASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC42BPAQ5VT25 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 RN7SL494P-201ENST00000461517 304 ntBASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 TREHP1-201ENST00000531328 465 ntBASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 MIR6074-201ENST00000612054 107 ntBASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDC42BPAQ5VT25 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms