Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 AC211486.1-202ENST00000416371 468 ntBASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 AC254562.1-201ENST00000417586 456 ntBASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 AC211476.1-201ENST00000503899 468 ntBASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 AC073592.8-201ENST00000624126 511 ntBASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.56□□□□□ -0.24
LCN1P1Q5VSP4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 RPSAP43-201ENST00000402237 625 ntBASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CNN2P2-201ENST00000443536 909 ntBASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CNN2P3-201ENST00000450201 906 ntBASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 AC010327.4-202ENST00000591484 748 ntBASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 AL138828.2-201ENST00000615812 383 ntBASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 AL136317.3-201ENST00000618497 906 ntBASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.55□□□□□ -0.24
LCN1P1Q5VSP4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LCN1P1Q5VSP4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LCN1P1Q5VSP4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LCN1P1Q5VSP4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LCN1P1Q5VSP4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LCN1P1Q5VSP4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms