Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 TEX28P1-201ENST00000613479 1221 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 TEX28P2-201ENST00000617764 1221 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MYADML-201ENST00000474610 2147 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 AC011840.2-201ENST00000563063 1520 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 DGCR9-201ENST00000609630 2415 ntBASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00242Q5T6M2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 AC099521.3-201ENST00000624251 2938 ntBASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 AC023794.5-201ENST00000564380 2157 ntBASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 AL353779.1-201ENST00000434793 351 ntBASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 YBX1P5-201ENST00000509441 847 ntBASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 POLD2P1-201ENST00000511220 997 ntBASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 TIMM17BP1-201ENST00000545713 516 ntBASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
LINC00242Q5T6M2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00242Q5T6M2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms