Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AC010740.1-201ENST00000417035 684 ntBASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 RN7SL440P-201ENST00000577855 343 ntBASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 RN7SL190P-201ENST00000582519 257 ntBASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RNFT1Q5M7Z0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 AC063926.3-201ENST00000624734 5658 ntBASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 CYP4F23P-201ENST00000593402 1579 ntBASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 PDIA3P2-201ENST00000428073 158 ntBASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 AC020922.3-201ENST00000595064 547 ntBASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RNFT1Q5M7Z0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms