Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
EFNB3Q15768 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
EFNB3Q15768 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB3Q15768 AC106881.1-201ENST00000605849 3329 ntBASIC12.68□□□□□ -0.38
EFNB3Q15768 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
EFNB3Q15768 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
EFNB3Q15768 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.68□□□□□ -0.38
EFNB3Q15768 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.68□□□□□ -0.38
EFNB3Q15768 AC106794.1-201ENST00000506935 792 ntBASIC12.68□□□□□ -0.38
EFNB3Q15768 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.68□□□□□ -0.38
EFNB3Q15768 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.68□□□□□ -0.38
EFNB3Q15768 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.68□□□□□ -0.38
EFNB3Q15768 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 AC132192.2-201ENST00000596206 1147 ntBASIC12.68□□□□□ -0.38
EFNB3Q15768 BNIP3P13-201ENST00000599968 566 ntBASIC12.68□□□□□ -0.38
EFNB3Q15768 AC138649.2-201ENST00000615886 705 ntBASIC12.68□□□□□ -0.38
EFNB3Q15768 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 PCDHA3-202ENST00000532566 4594 ntBASIC12.68□□□□□ -0.38
EFNB3Q15768 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB3Q15768 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
EFNB3Q15768 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB3Q15768 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
EFNB3Q15768 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
EFNB3Q15768 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
EFNB3Q15768 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
EFNB3Q15768 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 AL008707.1-201ENST00000422498 534 ntBASIC12.67□□□□□ -0.38
EFNB3Q15768 AL035414.1-201ENST00000451327 857 ntBASIC12.67□□□□□ -0.38
EFNB3Q15768 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB3Q15768 AC005740.2-201ENST00000511085 419 ntBASIC12.67□□□□□ -0.38
EFNB3Q15768 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.67□□□□□ -0.38
EFNB3Q15768 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB3Q15768 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.67□□□□□ -0.38
EFNB3Q15768 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 RN7SL163P-201ENST00000583100 276 ntBASIC12.67□□□□□ -0.38
EFNB3Q15768 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB3Q15768 AC005324.6-201ENST00000587972 613 ntBASIC12.67□□□□□ -0.38
EFNB3Q15768 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
EFNB3Q15768 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.67□□□□□ -0.38
EFNB3Q15768 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB3Q15768 AC022748.3-201ENST00000621828 275 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms