Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC009093.10-201ENST00000641956 1442 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 AC136759.1-202ENST00000530858 2194 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 MX1-218ENST00000619682 1980 ntTSL 5 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.05■□□□□ 0.8
CGNL1Q0VF96 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGNL1Q0VF96 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 AC097724.1-201ENST00000609581 426 ntBASIC20.04■□□□□ 0.8
CGNL1Q0VF96 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 TMBIM7P-202ENST00000641474 1516 ntBASIC20.04■□□□□ 0.8
CGNL1Q0VF96 AC144522.1-201ENST00000625111 1658 ntBASIC20.04■□□□□ 0.8
CGNL1Q0VF96 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 KHSRPP1-201ENST00000427983 1768 ntBASIC20.04■□□□□ 0.8
CGNL1Q0VF96 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CGNL1Q0VF96 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.03■□□□□ 0.8
CGNL1Q0VF96 AC078875.1-201ENST00000431907 724 ntBASIC20.03■□□□□ 0.8
CGNL1Q0VF96 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 AL805961.1-203ENST00000641078 1258 ntBASIC20.03■□□□□ 0.8
CGNL1Q0VF96 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 FGD5P1-202ENST00000614866 2498 ntBASIC20.03■□□□□ 0.8
CGNL1Q0VF96 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGNL1Q0VF96 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms