Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.64□□□□□ -0.39
COL10A1Q03692 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
COL10A1Q03692 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COL10A1Q03692 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
COL10A1Q03692 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COL10A1Q03692 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.64□□□□□ -0.39
COL10A1Q03692 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.64□□□□□ -0.39
COL10A1Q03692 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.64□□□□□ -0.39
COL10A1Q03692 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
COL10A1Q03692 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COL10A1Q03692 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COL10A1Q03692 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.63□□□□□ -0.39
COL10A1Q03692 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
COL10A1Q03692 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
COL10A1Q03692 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.63□□□□□ -0.39
COL10A1Q03692 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.63□□□□□ -0.39
COL10A1Q03692 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 EIF3FP3-201ENST00000434851 1086 ntBASIC12.63□□□□□ -0.39
COL10A1Q03692 GAPDHP21-201ENST00000450301 1010 ntBASIC12.63□□□□□ -0.39
COL10A1Q03692 AC022137.2-201ENST00000503482 481 ntBASIC12.63□□□□□ -0.39
COL10A1Q03692 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.63□□□□□ -0.39
COL10A1Q03692 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.63□□□□□ -0.39
COL10A1Q03692 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.63□□□□□ -0.39
COL10A1Q03692 AL603764.1-201ENST00000636452 321 ntBASIC12.63□□□□□ -0.39
COL10A1Q03692 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.63□□□□□ -0.39
COL10A1Q03692 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 AC140479.7-201ENST00000636301 2332 ntBASIC12.63□□□□□ -0.39
COL10A1Q03692 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
COL10A1Q03692 ST20-AS1-201ENST00000560255 4223 ntBASIC12.63□□□□□ -0.39
COL10A1Q03692 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.63□□□□□ -0.39
COL10A1Q03692 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
COL10A1Q03692 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COL10A1Q03692 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
COL10A1Q03692 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COL10A1Q03692 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.62□□□□□ -0.39
COL10A1Q03692 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.62□□□□□ -0.39
COL10A1Q03692 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
COL10A1Q03692 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.62□□□□□ -0.39
COL10A1Q03692 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
COL10A1Q03692 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL10A1Q03692 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms