Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.96■□□□□ 0.47
SCN7AQ01118 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.96■□□□□ 0.47
SCN7AQ01118 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SCN7AQ01118 HMGB1P24-201ENST00000611897 328 ntBASIC17.96■□□□□ 0.47
SCN7AQ01118 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SCN7AQ01118 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SCN7AQ01118 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN7AQ01118 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.95■□□□□ 0.46
SCN7AQ01118 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
SCN7AQ01118 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN7AQ01118 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A21P-201ENST00000510875 1396 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A15P-201ENST00000514465 1395 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A6P-201ENST00000515148 1394 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A16P-201ENST00000526662 1395 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A9P-201ENST00000527940 1395 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A5P-201ENST00000528738 1395 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A14P-201ENST00000530386 1395 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 FAM90A13P-201ENST00000534703 1395 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN7AQ01118 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SCN7AQ01118 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN7AQ01118 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN7AQ01118 AL135901.1-201ENST00000451812 333 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 CHCHD2P2-201ENST00000503744 321 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN7AQ01118 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN7AQ01118 RN7SL596P-201ENST00000582123 288 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 AP005264.5-201ENST00000590066 467 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 AC008972.2-201ENST00000606587 494 ntBASIC17.95■□□□□ 0.46
SCN7AQ01118 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN7AQ01118 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SCN7AQ01118 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN7AQ01118 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
SCN7AQ01118 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN7AQ01118 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN7AQ01118 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN7AQ01118 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN7AQ01118 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN7AQ01118 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN7AQ01118 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
SCN7AQ01118 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN7AQ01118 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.94■□□□□ 0.46
SCN7AQ01118 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 RN7SL767P-201ENST00000493013 295 ntBASIC17.94■□□□□ 0.46
SCN7AQ01118 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN7AQ01118 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 AC006483.2-201ENST00000609813 515 ntBASIC17.94■□□□□ 0.46
SCN7AQ01118 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN7AQ01118 AC002472.4-201ENST00000641915 272 ntBASIC17.94■□□□□ 0.46
SCN7AQ01118 ODCP-201ENST00000459650 1639 ntBASIC17.94■□□□□ 0.46
SCN7AQ01118 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN7AQ01118 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 MYADML-201ENST00000474610 2147 ntBASIC17.94■□□□□ 0.46
SCN7AQ01118 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN7AQ01118 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN7AQ01118 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.93■□□□□ 0.46
SCN7AQ01118 AC026470.1-201ENST00000478038 846 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 VENTXP3-201ENST00000546480 773 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SCN7AQ01118 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
SCN7AQ01118 AC073347.1-201ENST00000421633 2643 ntBASIC17.93■□□□□ 0.46
SCN7AQ01118 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN7AQ01118 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN7AQ01118 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
SCN7AQ01118 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms