Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RPS9P1-201ENST00000419943 583 ntBASIC12.8□□□□□ -0.36
ABCA4P78363 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
ABCA4P78363 AC073150.1-201ENST00000450406 1084 ntBASIC12.8□□□□□ -0.36
ABCA4P78363 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 RN7SL163P-201ENST00000583100 276 ntBASIC12.8□□□□□ -0.36
ABCA4P78363 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.8□□□□□ -0.36
ABCA4P78363 AL353770.1-201ENST00000614915 403 ntBASIC12.8□□□□□ -0.36
ABCA4P78363 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.8□□□□□ -0.36
ABCA4P78363 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.8□□□□□ -0.36
ABCA4P78363 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
ABCA4P78363 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
ABCA4P78363 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.8□□□□□ -0.36
ABCA4P78363 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.8□□□□□ -0.36
ABCA4P78363 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ABCA4P78363 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
ABCA4P78363 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
ABCA4P78363 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.8□□□□□ -0.36
ABCA4P78363 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ABCA4P78363 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
ABCA4P78363 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.79□□□□□ -0.36
ABCA4P78363 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.79□□□□□ -0.36
ABCA4P78363 RN7SL67P-201ENST00000492147 296 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 AC005740.2-201ENST00000511085 419 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ABCA4P78363 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.79□□□□□ -0.36
ABCA4P78363 MEG3_2.1-201ENST00000611456 105 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 AC012508.2-201ENST00000567613 1472 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 DOC2GP-204ENST00000639052 2548 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
ABCA4P78363 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.79□□□□□ -0.36
ABCA4P78363 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.79□□□□□ -0.36
ABCA4P78363 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 AL139008.1-201ENST00000437894 228 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.79□□□□□ -0.36
ABCA4P78363 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
ABCA4P78363 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.79□□□□□ -0.36
ABCA4P78363 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.79□□□□□ -0.36
ABCA4P78363 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ABCA4P78363 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 MIR6756-201ENST00000616240 63 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ABCA4P78363 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 AC006504.5-208ENST00000588784 2401 ntBASIC12.79□□□□□ -0.36
ABCA4P78363 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ABCA4P78363 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ABCA4P78363 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ABCA4P78363 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
ABCA4P78363 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ABCA4P78363 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.78□□□□□ -0.36
ABCA4P78363 POU5F1P2-201ENST00000521750 823 ntBASIC12.78□□□□□ -0.36
ABCA4P78363 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.78□□□□□ -0.36
ABCA4P78363 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms