Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.94□□□□□ -0.02
AP1S1P61966 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP1S1P61966 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.94□□□□□ -0.02
AP1S1P61966 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 AL354877.1-201ENST00000424412 413 ntBASIC14.94□□□□□ -0.02
AP1S1P61966 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
AP1S1P61966 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.94□□□□□ -0.02
AP1S1P61966 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.94□□□□□ -0.02
AP1S1P61966 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.94□□□□□ -0.02
AP1S1P61966 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.94□□□□□ -0.02
AP1S1P61966 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
AP1S1P61966 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 AC103988.2-201ENST00000561804 725 ntBASIC14.94□□□□□ -0.02
AP1S1P61966 DUX4L46-201ENST00000566845 751 ntBASIC14.94□□□□□ -0.02
AP1S1P61966 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.94□□□□□ -0.02
AP1S1P61966 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.94□□□□□ -0.02
AP1S1P61966 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.94□□□□□ -0.02
AP1S1P61966 AC027601.3-201ENST00000622907 509 ntBASIC14.94□□□□□ -0.02
AP1S1P61966 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP1S1P61966 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
AP1S1P61966 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.94□□□□□ -0.02
AP1S1P61966 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.94□□□□□ -0.02
AP1S1P61966 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
AP1S1P61966 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP1S1P61966 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP1S1P61966 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP1S1P61966 AC139712.1-201ENST00000378256 1875 ntBASIC14.93□□□□□ -0.02
AP1S1P61966 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP1S1P61966 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S1P61966 CICP12-201ENST00000455801 843 ntBASIC14.93□□□□□ -0.02
AP1S1P61966 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.93□□□□□ -0.02
AP1S1P61966 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP1S1P61966 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S1P61966 AC132192.2-201ENST00000596206 1147 ntBASIC14.93□□□□□ -0.02
AP1S1P61966 AC009955.4-201ENST00000597192 544 ntBASIC14.93□□□□□ -0.02
AP1S1P61966 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S1P61966 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
AP1S1P61966 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.93□□□□□ -0.02
AP1S1P61966 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S1P61966 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
AP1S1P61966 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
AP1S1P61966 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.92□□□□□ -0.02
AP1S1P61966 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S1P61966 BRWD1P1-201ENST00000401091 371 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms